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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
UCEC cis rs9473555 1 rs9463474 chr6:49380199 MUT chr6:49398994-49431031:- 0.35 5.86 2.72E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9463475 chr6:49380899 MUT chr6:49398994-49431031:- -0.35 -5.86 2.72E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9463477 chr6:49386446 MUT chr6:49398994-49431031:- 0.35 5.86 2.72E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9463479 chr6:49393275 MUT chr6:49398994-49431031:- 0.35 5.83 3.28E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9463480 chr6:49400795 MUT chr6:49398994-49431031:- 0.35 5.86 2.76E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473549 chr6:49380020 MUT chr6:49398994-49431031:- 0.4 6.62 5.86E-10 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473552 chr6:49387154 MUT chr6:49398994-49431031:- 0.35 5.83 3.28E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473553 chr6:49395977 MUT chr6:49398994-49431031:- 0.35 5.82 3.34E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473555 chr6:49409487 MUT chr6:49398994-49431031:- 0.35 5.86 2.76E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473560 chr6:49427918 MUT chr6:49398994-49431031:- 0.35 5.93 1.99E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473561 chr6:49428755 MUT chr6:49398994-49431031:- 0.35 5.81 3.59E-8 Folate pathway vitamin levels
UCEC cis rs9473555 1 rs9473563 chr6:49453651 MUT chr6:49398994-49431031:- 0.4 6.67 4.43E-10 Folate pathway vitamin levels
UCEC cis rs950169 1 rs950169 chr15:84706461 LOC388152 chr15:84867600-84898920:- -0.47 -4.86 2.9E-6 Schizophrenia
UCEC cis rs1577917 1 rs955196 chr6:86729951 SNHG5 chr6:86386726-86388451:- 0.55 6.33 2.57E-9 Response to antipsychotic treatment
UCEC cis rs1577917 1 rs955197 chr6:86729675 SNHG5 chr6:86386726-86388451:- -0.49 -5.75 4.69E-8 Response to antipsychotic treatment